mgnipy.emgapi_v2_client.models.m_gnify_analysis module

mgnipy.emgapi_v2_client.models.m_gnify_analysis module#

class mgnipy.emgapi_v2_client.models.m_gnify_analysis.MGnifyAnalysis(experiment_type, study_accession, accession, run, sample, assembly, pipeline_version)[source]#

Bases: object

Parameters:
experiment_type#

Experiment type refers to the type of sequencing data that was analysed, e.g. amplicon reads or a metagenome assembly

Type:

str

study_accession#
Type:

str

accession#
Type:

str

run#
Type:

AnalysedRun | None

sample#
Type:

MGnifySample | None

assembly#
Type:

Assembly | None

pipeline_version#
Type:

None | PipelineVersions

accession: str #
property additional_keys: list [str ]#
additional_properties: dict [str , Any]#
assembly: Assembly | None #
experiment_type: str #
classmethod from_dict(src_dict)[source]#
Parameters:

src_dict (Mapping [str , Any ])

Return type:

T

pipeline_version: None | PipelineVersions#
run: AnalysedRun | None #
sample: MGnifySample | None #
study_accession: str #
to_dict()[source]#
Return type:

dict [str , Any ]

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