Skip to main content
Ctrl+K
mgnipy 0.1.dev1+g579d6b3be documentation - Home
  • GitHub
  • MGni.py

Getting started

  • What is MGni.py?
  • Installation
  • Accessing MGnify API Resources
  • Downloading MGnify Study data

Fundamentals and usage

  • The mgnipy.MGnipy() client
  • mgnipy.MGnifiers as API Resource proxies
  • A MGnifyList of records
  • Configuring MGnipyConfig
  • Understanding the cache
  • Accessing your private data
  • MGazine of MGnify data

Demos

  • Finding Parkinson’s disease taxonomic analyses

Reference

  • mgnipy.mgnipy module
  • mgnipy.V2.proxies package
  • mgnipy.V2.core module
  • mgnipy.V2.datasets package
  • mgnipy.V2.query_executor module
  • mgnipy.V2.query_set module
  • mgnipy.V2.mixins module
  • mgnipy.V2.describe module
  • mgnipy.emgapi_v2_client.client module
  • mgnipy.emgapi_v2_client.api package

Contributor's Guide

  • Contributing code
  • The emgapi_v2_client
  • What is openapi-python-client
  • Docs creation
  • Repository
  • Suggest edit
  • .rst

mgnipy.emgapi_v2_client.models.genome_assembly_link_schema module

Contents

  • GenomeAssemblyLinkSchema
    • GenomeAssemblyLinkSchema.genome
    • GenomeAssemblyLinkSchema.updated_at
    • GenomeAssemblyLinkSchema.species_rep
    • GenomeAssemblyLinkSchema.mag_accession
    • GenomeAssemblyLinkSchema.additional_keys
    • GenomeAssemblyLinkSchema.additional_properties
    • GenomeAssemblyLinkSchema.from_dict()
    • GenomeAssemblyLinkSchema.genome
    • GenomeAssemblyLinkSchema.mag_accession
    • GenomeAssemblyLinkSchema.species_rep
    • GenomeAssemblyLinkSchema.to_dict()
    • GenomeAssemblyLinkSchema.updated_at

mgnipy.emgapi_v2_client.models.genome_assembly_link_schema module#

class mgnipy.emgapi_v2_client.models.genome_assembly_link_schema.GenomeAssemblyLinkSchema(genome, updated_at, species_rep=<mgnipy.emgapi_v2_client.types.Unset object>, mag_accession=<mgnipy.emgapi_v2_client.types.Unset object>)[source]#

Bases: object

Parameters:
  • genome (GenomeSchema)

  • updated_at (datetime.datetime | None)

  • species_rep (None | str | Unset)

  • mag_accession (None | str | Unset)

genome#

Simple schema for a Genome model.

Type:

GenomeSchema

updated_at#
Type:

datetime.datetime | None

species_rep#

Deposition database accession for species representative

Type:

None | str | Unset

mag_accession#

Deposition database for MAG

Type:

None | str | Unset

property additional_keys: list [str ]#
additional_properties: dict [str , Any]#
classmethod from_dict(src_dict)[source]#
Parameters:

src_dict (Mapping [str , Any ])

Return type:

T

genome: GenomeSchema#
mag_accession: None | str | Unset#
species_rep: None | str | Unset#
to_dict()[source]#
Return type:

dict [str , Any ]

updated_at: datetime.datetime | None #
Contents
  • GenomeAssemblyLinkSchema
    • GenomeAssemblyLinkSchema.genome
    • GenomeAssemblyLinkSchema.updated_at
    • GenomeAssemblyLinkSchema.species_rep
    • GenomeAssemblyLinkSchema.mag_accession
    • GenomeAssemblyLinkSchema.additional_keys
    • GenomeAssemblyLinkSchema.additional_properties
    • GenomeAssemblyLinkSchema.from_dict()
    • GenomeAssemblyLinkSchema.genome
    • GenomeAssemblyLinkSchema.mag_accession
    • GenomeAssemblyLinkSchema.species_rep
    • GenomeAssemblyLinkSchema.to_dict()
    • GenomeAssemblyLinkSchema.updated_at

By MGnify

© Copyright 2026, MGnify.