Source code for mgnipy.emgapi_v2_client.models.genome_schema
from __future__ import annotations
from collections.abc import Mapping
from typing import (
Any,
TypeVar,
cast,
)
from attrs import define as _attrs_define
from attrs import field as _attrs_field
from ..types import (
UNSET,
Unset,
)
T = TypeVar("T", bound="GenomeSchema")
[docs]
@_attrs_define
class GenomeSchema:
"""Simple schema for a Genome model.
Attributes:
accession (str):
catalogue_id (None | str):
taxon_lineage (None | str):
ena_genome_accession (None | str):
catalogue_version (None | str | Unset): Version of the genome catalogue
"""
accession: str
catalogue_id: None | str
taxon_lineage: None | str
ena_genome_accession: None | str
catalogue_version: None | str | Unset = UNSET
additional_properties: dict[str, Any] = _attrs_field(init=False, factory=dict)
[docs]
def to_dict(self) -> dict[str, Any]:
accession = self.accession
catalogue_id: None | str
catalogue_id = self.catalogue_id
taxon_lineage: None | str
taxon_lineage = self.taxon_lineage
ena_genome_accession: None | str
ena_genome_accession = self.ena_genome_accession
catalogue_version: None | str | Unset
if isinstance(self.catalogue_version, Unset):
catalogue_version = UNSET
else:
catalogue_version = self.catalogue_version
field_dict: dict[str, Any] = {}
field_dict.update(self.additional_properties)
field_dict.update(
{
"accession": accession,
"catalogue_id": catalogue_id,
"taxon_lineage": taxon_lineage,
"ena_genome_accession": ena_genome_accession,
}
)
if catalogue_version is not UNSET:
field_dict["catalogue_version"] = catalogue_version
return field_dict
[docs]
@classmethod
def from_dict(cls: type[T], src_dict: Mapping[str, Any]) -> T:
d = dict(src_dict)
accession = d.pop("accession")
def _parse_catalogue_id(data: object) -> None | str:
if data is None:
return data
return cast(None | str, data)
catalogue_id = _parse_catalogue_id(d.pop("catalogue_id"))
def _parse_taxon_lineage(data: object) -> None | str:
if data is None:
return data
return cast(None | str, data)
taxon_lineage = _parse_taxon_lineage(d.pop("taxon_lineage"))
def _parse_ena_genome_accession(data: object) -> None | str:
if data is None:
return data
return cast(None | str, data)
ena_genome_accession = _parse_ena_genome_accession(
d.pop("ena_genome_accession")
)
def _parse_catalogue_version(data: object) -> None | str | Unset:
if data is None:
return data
if isinstance(data, Unset):
return data
return cast(None | str | Unset, data)
catalogue_version = _parse_catalogue_version(d.pop("catalogue_version", UNSET))
genome_schema = cls(
accession=accession,
catalogue_id=catalogue_id,
taxon_lineage=taxon_lineage,
ena_genome_accession=ena_genome_accession,
catalogue_version=catalogue_version,
)
genome_schema.additional_properties = d
return genome_schema
@property
def additional_keys(self) -> list[str]:
return list(self.additional_properties.keys())
def __getitem__(self, key: str) -> Any:
return self.additional_properties[key]
def __setitem__(self, key: str, value: Any) -> None:
self.additional_properties[key] = value
def __delitem__(self, key: str) -> None:
del self.additional_properties[key]
def __contains__(self, key: str) -> bool:
return key in self.additional_properties