mgnipy package#
Subpackages#
- mgnipy.V2 package
MGnifierMGnifier.get()MGnifier.aget()MGnifier.page()MGnifier.apage()MGnifier.afirst()MGnifier.base_urlMGnifier.dataMGnifier.describe_endpoint()MGnifier.describe_relationships()MGnifier.dry_run()MGnifier.emgapi_docsMGnifier.emgapi_resourceMGnifier.endpoint_moduleMGnifier.explain()MGnifier.filter()MGnifier.first()MGnifier.id_param_keyMGnifier.identifierMGnifier.list_relationships()MGnifier.list_supported_params()MGnifier.list_urls()MGnifier.page_size()MGnifier.pagination_statusMGnifier.paramsMGnifier.preview()MGnifier.request_urlMGnifier.resolve_query_string()MGnifier.resourceMGnifier.resultsMGnifier.results_idsMGnifier.sub_url()MGnifier.to_df()MGnifier.to_json()MGnifier.to_list()MGnifier.to_polars()MGnifier.url_path()MGnifier.validate_endpoint_kwargs()
BiomesBiomes.RESOURCEBiomes.acollect_details()Biomes.afirst()Biomes.aget()Biomes.aget_detail()Biomes.aiter_details()Biomes.apage()Biomes.base_urlBiomes.collect_details()Biomes.dataBiomes.describe_endpoint()Biomes.describe_relationships()Biomes.dry_run()Biomes.emgapi_docsBiomes.emgapi_resourceBiomes.endpoint_moduleBiomes.explain()Biomes.filter()Biomes.first()Biomes.get()Biomes.get_detail()Biomes.id_param_keyBiomes.identifierBiomes.iter_details()Biomes.lineagesBiomes.list_relationships()Biomes.list_supported_params()Biomes.list_urls()Biomes.page()Biomes.page_size()Biomes.pagination_statusBiomes.paramsBiomes.preview()Biomes.request_urlBiomes.resolve_query_string()Biomes.resourceBiomes.resultsBiomes.results_idsBiomes.show_tree()Biomes.sub_url()Biomes.to_df()Biomes.to_json()Biomes.to_list()Biomes.to_polars()Biomes.treeBiomes.url_path()Biomes.validate_endpoint_kwargs()
StudiesStudies.RESOURCEStudies.acollect_details()Studies.afirst()Studies.aget()Studies.aget_detail()Studies.aiter_details()Studies.apage()Studies.base_urlStudies.collect_details()Studies.dataStudies.describe_endpoint()Studies.describe_relationships()Studies.dry_run()Studies.emgapi_docsStudies.emgapi_resourceStudies.endpoint_moduleStudies.explain()Studies.filter()Studies.first()Studies.get()Studies.get_detail()Studies.id_param_keyStudies.identifierStudies.iter_details()Studies.list_relationships()Studies.list_supported_params()Studies.list_urls()Studies.page()Studies.page_size()Studies.pagination_statusStudies.paramsStudies.preview()Studies.request_urlStudies.resolve_query_string()Studies.resourceStudies.resultsStudies.results_idsStudies.sub_url()Studies.to_df()Studies.to_json()Studies.to_list()Studies.to_polars()Studies.url_path()Studies.validate_endpoint_kwargs()Studies.child_resourceStudies.configStudies.execStudies.countStudies.total_pagesStudies.default_page_sizeStudies.request_urls
SamplesSamples.RESOURCESamples.acollect_details()Samples.afirst()Samples.aget()Samples.aget_detail()Samples.aiter_details()Samples.apage()Samples.base_urlSamples.collect_details()Samples.dataSamples.describe_endpoint()Samples.describe_relationships()Samples.dry_run()Samples.emgapi_docsSamples.emgapi_resourceSamples.endpoint_moduleSamples.explain()Samples.filter()Samples.first()Samples.get()Samples.get_detail()Samples.id_param_keySamples.identifierSamples.iter_details()Samples.list_relationships()Samples.list_supported_params()Samples.list_urls()Samples.page()Samples.page_size()Samples.pagination_statusSamples.paramsSamples.preview()Samples.request_urlSamples.resolve_query_string()Samples.resourceSamples.resultsSamples.results_idsSamples.sub_url()Samples.to_df()Samples.to_json()Samples.to_list()Samples.to_polars()Samples.url_path()Samples.validate_endpoint_kwargs()Samples.child_resourceSamples.configSamples.execSamples.countSamples.total_pagesSamples.default_page_sizeSamples.request_urls
AnalysesAnalyses.RESOURCEAnalyses.acollect_details()Analyses.afirst()Analyses.aget()Analyses.aget_detail()Analyses.aiter_details()Analyses.apage()Analyses.base_urlAnalyses.collect_details()Analyses.dataAnalyses.describe_endpoint()Analyses.describe_relationships()Analyses.dry_run()Analyses.emgapi_docsAnalyses.emgapi_resourceAnalyses.endpoint_moduleAnalyses.explain()Analyses.filter()Analyses.first()Analyses.get()Analyses.get_detail()Analyses.id_param_keyAnalyses.identifierAnalyses.iter_details()Analyses.list_relationships()Analyses.list_supported_params()Analyses.list_urls()Analyses.page()Analyses.page_size()Analyses.pagination_statusAnalyses.paramsAnalyses.preview()Analyses.request_urlAnalyses.resolve_query_string()Analyses.resourceAnalyses.resultsAnalyses.results_idsAnalyses.sub_url()Analyses.to_df()Analyses.to_json()Analyses.to_list()Analyses.to_polars()Analyses.url_path()Analyses.validate_endpoint_kwargs()Analyses.child_resourceAnalyses.configAnalyses.execAnalyses.countAnalyses.total_pagesAnalyses.default_page_sizeAnalyses.request_urls
GenomesGenomes.RESOURCEGenomes.acollect_details()Genomes.afirst()Genomes.aget()Genomes.aget_detail()Genomes.aiter_details()Genomes.apage()Genomes.base_urlGenomes.collect_details()Genomes.dataGenomes.describe_endpoint()Genomes.describe_relationships()Genomes.dry_run()Genomes.emgapi_docsGenomes.emgapi_resourceGenomes.endpoint_moduleGenomes.explain()Genomes.filter()Genomes.first()Genomes.get()Genomes.get_detail()Genomes.id_param_keyGenomes.identifierGenomes.iter_details()Genomes.list_relationships()Genomes.list_supported_params()Genomes.list_urls()Genomes.page()Genomes.page_size()Genomes.pagination_statusGenomes.paramsGenomes.preview()Genomes.request_urlGenomes.resolve_query_string()Genomes.resourceGenomes.resultsGenomes.results_idsGenomes.sub_url()Genomes.to_df()Genomes.to_json()Genomes.to_list()Genomes.to_polars()Genomes.url_path()Genomes.validate_endpoint_kwargs()Genomes.child_resourceGenomes.configGenomes.execGenomes.countGenomes.total_pagesGenomes.default_page_sizeGenomes.request_urls
ClientAuthenticatedClientAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.with_headers()AuthenticatedClient.with_cookies()AuthenticatedClient.with_timeout()AuthenticatedClient.set_httpx_client()AuthenticatedClient.get_httpx_client()AuthenticatedClient.set_async_httpx_client()AuthenticatedClient.get_async_httpx_client()
- Submodules
- mgnipy.V2.core module
MGnifierMGnifier.get()MGnifier.aget()MGnifier.page()MGnifier.apage()MGnifier.afirst()MGnifier.base_urlMGnifier.dataMGnifier.describe_endpoint()MGnifier.describe_relationships()MGnifier.dry_run()MGnifier.emgapi_docsMGnifier.emgapi_resourceMGnifier.endpoint_moduleMGnifier.explain()MGnifier.filter()MGnifier.first()MGnifier.id_param_keyMGnifier.identifierMGnifier.list_relationships()MGnifier.list_supported_params()MGnifier.list_urls()MGnifier.page_size()MGnifier.pagination_statusMGnifier.paramsMGnifier.preview()MGnifier.request_urlMGnifier.resolve_query_string()MGnifier.resourceMGnifier.resultsMGnifier.results_idsMGnifier.sub_url()MGnifier.to_df()MGnifier.to_json()MGnifier.to_list()MGnifier.to_polars()MGnifier.url_path()MGnifier.validate_endpoint_kwargs()MGnifier.configMGnifier.execMGnifier.countMGnifier.total_pagesMGnifier.default_page_sizeMGnifier.request_urls
- mgnipy.V2.datasets module
MGazineMGazine.url_dictMGazine.downloads_dfMGazine.url_listMGazine.stream_tsv()MGazine.stream_html()MGazine.stream_txt()MGazine.stream_fasta()MGazine.stream_gff()MGazine.stream_biom()MGazine.stream_gzipped()MGazine.stream_jsonl()MGazine.stream_json()MGazine.stream_tree()MGazine.stream()MGazine.download()MGazine.adownload()MGazine.adownload_all()MGazine.download_all()MGazine.experiment_typeMGazine.study_accessionMGazine.accessionMGazine.runMGazine.sampleMGazine.assemblyMGazine.pipeline_versionMGazine.read_runMGazine.quality_control_summaryMGazine.annotationsMGazine.downloadsMGazine.results_dirMGazine.metadataMGazine.additional_propertiesMGazine.additional_keysMGazine.from_dict()MGazine.to_dict()
MGazineCurator
- mgnipy.V2.endpoints module
- mgnipy.V2.mixins module
ResultsHandlerMixinBiomesTreeMixinDescribeEmgapiMixinDescribeEmgapiMixin.endpoint_module()DescribeEmgapiMixin.list_supported_params()DescribeEmgapiMixin.validate_endpoint_kwargs()DescribeEmgapiMixin.emgapi_resourceDescribeEmgapiMixin.sub_url()DescribeEmgapiMixin.resolve_query_string()DescribeEmgapiMixin.url_path()DescribeEmgapiMixin.emgapi_docsDescribeEmgapiMixin.describe_endpoint()
- mgnipy.V2.proxies module
MGnifyListMGnifyList.RESOURCEMGnifyList.child_resourceMGnifyList.iter_details()MGnifyList.collect_details()MGnifyList.aiter_details()MGnifyList.acollect_details()MGnifyList.get_detail()MGnifyList.aget_detail()MGnifyList.afirst()MGnifyList.aget()MGnifyList.apage()MGnifyList.base_urlMGnifyList.dataMGnifyList.describe_endpoint()MGnifyList.describe_relationships()MGnifyList.dry_run()MGnifyList.emgapi_docsMGnifyList.emgapi_resourceMGnifyList.endpoint_moduleMGnifyList.explain()MGnifyList.filter()MGnifyList.first()MGnifyList.get()MGnifyList.id_param_keyMGnifyList.identifierMGnifyList.list_relationships()MGnifyList.list_supported_params()MGnifyList.list_urls()MGnifyList.page()MGnifyList.page_size()MGnifyList.pagination_statusMGnifyList.paramsMGnifyList.preview()MGnifyList.request_urlMGnifyList.resolve_query_string()MGnifyList.resourceMGnifyList.resultsMGnifyList.results_idsMGnifyList.sub_url()MGnifyList.to_df()MGnifyList.to_json()MGnifyList.to_list()MGnifyList.to_polars()MGnifyList.url_path()MGnifyList.validate_endpoint_kwargs()MGnifyList.configMGnifyList.execMGnifyList.countMGnifyList.total_pagesMGnifyList.default_page_sizeMGnifyList.request_urls
MGnifyDetailMGnifyDetail.RESOURCEMGnifyDetail.get_list()MGnifyDetail.aget_list()MGnifyDetail.afirst()MGnifyDetail.aget()MGnifyDetail.apage()MGnifyDetail.base_urlMGnifyDetail.dataMGnifyDetail.describe_endpoint()MGnifyDetail.describe_relationships()MGnifyDetail.dry_run()MGnifyDetail.emgapi_docsMGnifyDetail.emgapi_resourceMGnifyDetail.endpoint_moduleMGnifyDetail.explain()MGnifyDetail.filter()MGnifyDetail.first()MGnifyDetail.get()MGnifyDetail.id_param_keyMGnifyDetail.identifierMGnifyDetail.list_relationships()MGnifyDetail.list_supported_params()MGnifyDetail.list_urls()MGnifyDetail.page()MGnifyDetail.page_size()MGnifyDetail.pagination_statusMGnifyDetail.paramsMGnifyDetail.preview()MGnifyDetail.request_urlMGnifyDetail.resolve_query_string()MGnifyDetail.resourceMGnifyDetail.resultsMGnifyDetail.results_idsMGnifyDetail.sub_url()MGnifyDetail.to_df()MGnifyDetail.to_json()MGnifyDetail.to_list()MGnifyDetail.to_polars()MGnifyDetail.url_path()MGnifyDetail.validate_endpoint_kwargs()MGnifyDetail.configMGnifyDetail.execMGnifyDetail.countMGnifyDetail.total_pagesMGnifyDetail.default_page_sizeMGnifyDetail.request_urls
AnalysesAnalyses.RESOURCEAnalyses.acollect_details()Analyses.afirst()Analyses.aget()Analyses.aget_detail()Analyses.aiter_details()Analyses.apage()Analyses.base_urlAnalyses.collect_details()Analyses.dataAnalyses.describe_endpoint()Analyses.describe_relationships()Analyses.dry_run()Analyses.emgapi_docsAnalyses.emgapi_resourceAnalyses.endpoint_moduleAnalyses.explain()Analyses.filter()Analyses.first()Analyses.get()Analyses.get_detail()Analyses.id_param_keyAnalyses.identifierAnalyses.iter_details()Analyses.list_relationships()Analyses.list_supported_params()Analyses.list_urls()Analyses.page()Analyses.page_size()Analyses.pagination_statusAnalyses.paramsAnalyses.preview()Analyses.request_urlAnalyses.resolve_query_string()Analyses.resourceAnalyses.resultsAnalyses.results_idsAnalyses.sub_url()Analyses.to_df()Analyses.to_json()Analyses.to_list()Analyses.to_polars()Analyses.url_path()Analyses.validate_endpoint_kwargs()Analyses.child_resourceAnalyses.configAnalyses.execAnalyses.countAnalyses.total_pagesAnalyses.default_page_sizeAnalyses.request_urls
RunsRuns.RESOURCERuns.acollect_details()Runs.afirst()Runs.aget()Runs.aget_detail()Runs.aiter_details()Runs.apage()Runs.base_urlRuns.collect_details()Runs.dataRuns.describe_endpoint()Runs.describe_relationships()Runs.dry_run()Runs.emgapi_docsRuns.emgapi_resourceRuns.endpoint_moduleRuns.explain()Runs.filter()Runs.first()Runs.get()Runs.get_detail()Runs.id_param_keyRuns.identifierRuns.iter_details()Runs.list_relationships()Runs.list_supported_params()Runs.list_urls()Runs.page()Runs.page_size()Runs.pagination_statusRuns.paramsRuns.preview()Runs.request_urlRuns.resolve_query_string()Runs.resourceRuns.resultsRuns.results_idsRuns.sub_url()Runs.to_df()Runs.to_json()Runs.to_list()Runs.to_polars()Runs.url_path()Runs.validate_endpoint_kwargs()Runs.child_resourceRuns.configRuns.execRuns.countRuns.total_pagesRuns.default_page_sizeRuns.request_urls
SamplesSamples.RESOURCESamples.acollect_details()Samples.afirst()Samples.aget()Samples.aget_detail()Samples.aiter_details()Samples.apage()Samples.base_urlSamples.collect_details()Samples.dataSamples.describe_endpoint()Samples.describe_relationships()Samples.dry_run()Samples.emgapi_docsSamples.emgapi_resourceSamples.endpoint_moduleSamples.explain()Samples.filter()Samples.first()Samples.get()Samples.get_detail()Samples.id_param_keySamples.identifierSamples.iter_details()Samples.list_relationships()Samples.list_supported_params()Samples.list_urls()Samples.page()Samples.page_size()Samples.pagination_statusSamples.paramsSamples.preview()Samples.request_urlSamples.resolve_query_string()Samples.resourceSamples.resultsSamples.results_idsSamples.sub_url()Samples.to_df()Samples.to_json()Samples.to_list()Samples.to_polars()Samples.url_path()Samples.validate_endpoint_kwargs()Samples.child_resourceSamples.configSamples.execSamples.countSamples.total_pagesSamples.default_page_sizeSamples.request_urls
StudiesStudies.RESOURCEStudies.acollect_details()Studies.afirst()Studies.aget()Studies.aget_detail()Studies.aiter_details()Studies.apage()Studies.base_urlStudies.collect_details()Studies.dataStudies.describe_endpoint()Studies.describe_relationships()Studies.dry_run()Studies.emgapi_docsStudies.emgapi_resourceStudies.endpoint_moduleStudies.explain()Studies.filter()Studies.first()Studies.get()Studies.get_detail()Studies.id_param_keyStudies.identifierStudies.iter_details()Studies.list_relationships()Studies.list_supported_params()Studies.list_urls()Studies.page()Studies.page_size()Studies.pagination_statusStudies.paramsStudies.preview()Studies.request_urlStudies.resolve_query_string()Studies.resourceStudies.resultsStudies.results_idsStudies.sub_url()Studies.to_df()Studies.to_json()Studies.to_list()Studies.to_polars()Studies.url_path()Studies.validate_endpoint_kwargs()Studies.child_resourceStudies.configStudies.execStudies.countStudies.total_pagesStudies.default_page_sizeStudies.request_urls
PrivateStudiesPrivateStudies.RESOURCEPrivateStudies.configPrivateStudies.acollect_details()PrivateStudies.afirst()PrivateStudies.aget()PrivateStudies.aget_detail()PrivateStudies.aiter_details()PrivateStudies.apage()PrivateStudies.base_urlPrivateStudies.collect_details()PrivateStudies.dataPrivateStudies.describe_endpoint()PrivateStudies.describe_relationships()PrivateStudies.dry_run()PrivateStudies.emgapi_docsPrivateStudies.emgapi_resourcePrivateStudies.endpoint_modulePrivateStudies.explain()PrivateStudies.filter()PrivateStudies.first()PrivateStudies.get()PrivateStudies.get_detail()PrivateStudies.id_param_keyPrivateStudies.identifierPrivateStudies.iter_details()PrivateStudies.list_relationships()PrivateStudies.list_supported_params()PrivateStudies.list_urls()PrivateStudies.page()PrivateStudies.page_size()PrivateStudies.pagination_statusPrivateStudies.paramsPrivateStudies.preview()PrivateStudies.request_urlPrivateStudies.resolve_query_string()PrivateStudies.resourcePrivateStudies.resultsPrivateStudies.results_idsPrivateStudies.sub_url()PrivateStudies.to_df()PrivateStudies.to_json()PrivateStudies.to_list()PrivateStudies.to_polars()PrivateStudies.url_path()PrivateStudies.validate_endpoint_kwargs()PrivateStudies.child_resourcePrivateStudies.execPrivateStudies.countPrivateStudies.total_pagesPrivateStudies.default_page_sizePrivateStudies.request_urls
BiomesBiomes.RESOURCEBiomes.acollect_details()Biomes.afirst()Biomes.aget()Biomes.aget_detail()Biomes.aiter_details()Biomes.apage()Biomes.base_urlBiomes.collect_details()Biomes.dataBiomes.describe_endpoint()Biomes.describe_relationships()Biomes.dry_run()Biomes.emgapi_docsBiomes.emgapi_resourceBiomes.endpoint_moduleBiomes.explain()Biomes.filter()Biomes.first()Biomes.get()Biomes.get_detail()Biomes.id_param_keyBiomes.identifierBiomes.iter_details()Biomes.lineagesBiomes.list_relationships()Biomes.list_supported_params()Biomes.list_urls()Biomes.page()Biomes.page_size()Biomes.pagination_statusBiomes.paramsBiomes.preview()Biomes.request_urlBiomes.resolve_query_string()Biomes.resourceBiomes.resultsBiomes.results_idsBiomes.show_tree()Biomes.sub_url()Biomes.to_df()Biomes.to_json()Biomes.to_list()Biomes.to_polars()Biomes.treeBiomes.url_path()Biomes.validate_endpoint_kwargs()Biomes.child_resourceBiomes.configBiomes.execBiomes.countBiomes.total_pagesBiomes.default_page_sizeBiomes.request_urls
AssembliesAssemblies.RESOURCEAssemblies.acollect_details()Assemblies.afirst()Assemblies.aget()Assemblies.aget_detail()Assemblies.aiter_details()Assemblies.apage()Assemblies.base_urlAssemblies.collect_details()Assemblies.dataAssemblies.describe_endpoint()Assemblies.describe_relationships()Assemblies.dry_run()Assemblies.emgapi_docsAssemblies.emgapi_resourceAssemblies.endpoint_moduleAssemblies.explain()Assemblies.filter()Assemblies.first()Assemblies.get()Assemblies.get_detail()Assemblies.id_param_keyAssemblies.identifierAssemblies.iter_details()Assemblies.list_relationships()Assemblies.list_supported_params()Assemblies.list_urls()Assemblies.page()Assemblies.page_size()Assemblies.pagination_statusAssemblies.paramsAssemblies.preview()Assemblies.request_urlAssemblies.resolve_query_string()Assemblies.resourceAssemblies.resultsAssemblies.results_idsAssemblies.sub_url()Assemblies.to_df()Assemblies.to_json()Assemblies.to_list()Assemblies.to_polars()Assemblies.url_path()Assemblies.validate_endpoint_kwargs()Assemblies.child_resourceAssemblies.configAssemblies.execAssemblies.countAssemblies.total_pagesAssemblies.default_page_sizeAssemblies.request_urls
GenomesGenomes.RESOURCEGenomes.acollect_details()Genomes.afirst()Genomes.aget()Genomes.aget_detail()Genomes.aiter_details()Genomes.apage()Genomes.base_urlGenomes.collect_details()Genomes.dataGenomes.describe_endpoint()Genomes.describe_relationships()Genomes.dry_run()Genomes.emgapi_docsGenomes.emgapi_resourceGenomes.endpoint_moduleGenomes.explain()Genomes.filter()Genomes.first()Genomes.get()Genomes.get_detail()Genomes.id_param_keyGenomes.identifierGenomes.iter_details()Genomes.list_relationships()Genomes.list_supported_params()Genomes.list_urls()Genomes.page()Genomes.page_size()Genomes.pagination_statusGenomes.paramsGenomes.preview()Genomes.request_urlGenomes.resolve_query_string()Genomes.resourceGenomes.resultsGenomes.results_idsGenomes.sub_url()Genomes.to_df()Genomes.to_json()Genomes.to_list()Genomes.to_polars()Genomes.url_path()Genomes.validate_endpoint_kwargs()Genomes.child_resourceGenomes.configGenomes.execGenomes.countGenomes.total_pagesGenomes.default_page_sizeGenomes.request_urls
PublicationsPublications.RESOURCEPublications.acollect_details()Publications.afirst()Publications.aget()Publications.aget_detail()Publications.aiter_details()Publications.apage()Publications.base_urlPublications.collect_details()Publications.dataPublications.describe_endpoint()Publications.describe_relationships()Publications.dry_run()Publications.emgapi_docsPublications.emgapi_resourcePublications.endpoint_modulePublications.explain()Publications.filter()Publications.first()Publications.get()Publications.get_detail()Publications.id_param_keyPublications.identifierPublications.iter_details()Publications.list_relationships()Publications.list_supported_params()Publications.list_urls()Publications.page()Publications.page_size()Publications.pagination_statusPublications.paramsPublications.preview()Publications.request_urlPublications.resolve_query_string()Publications.resourcePublications.resultsPublications.results_idsPublications.sub_url()Publications.to_df()Publications.to_json()Publications.to_list()Publications.to_polars()Publications.url_path()Publications.validate_endpoint_kwargs()Publications.child_resourcePublications.configPublications.execPublications.countPublications.total_pagesPublications.default_page_sizePublications.request_urls
CataloguesCatalogues.RESOURCECatalogues.acollect_details()Catalogues.afirst()Catalogues.aget()Catalogues.aget_detail()Catalogues.aiter_details()Catalogues.apage()Catalogues.base_urlCatalogues.collect_details()Catalogues.dataCatalogues.describe_endpoint()Catalogues.describe_relationships()Catalogues.dry_run()Catalogues.emgapi_docsCatalogues.emgapi_resourceCatalogues.endpoint_moduleCatalogues.explain()Catalogues.filter()Catalogues.first()Catalogues.get()Catalogues.get_detail()Catalogues.id_param_keyCatalogues.identifierCatalogues.iter_details()Catalogues.list_relationships()Catalogues.list_supported_params()Catalogues.list_urls()Catalogues.page()Catalogues.page_size()Catalogues.pagination_statusCatalogues.paramsCatalogues.preview()Catalogues.request_urlCatalogues.resolve_query_string()Catalogues.resourceCatalogues.resultsCatalogues.results_idsCatalogues.sub_url()Catalogues.to_df()Catalogues.to_json()Catalogues.to_list()Catalogues.to_polars()Catalogues.url_path()Catalogues.validate_endpoint_kwargs()Catalogues.child_resourceCatalogues.configCatalogues.execCatalogues.countCatalogues.total_pagesCatalogues.default_page_sizeCatalogues.request_urls
StudyDetailStudyDetail.RESOURCEStudyDetail.afirst()StudyDetail.aget()StudyDetail.aget_list()StudyDetail.apage()StudyDetail.base_urlStudyDetail.dataStudyDetail.describe_endpoint()StudyDetail.describe_relationships()StudyDetail.dry_run()StudyDetail.emgapi_docsStudyDetail.emgapi_resourceStudyDetail.endpoint_moduleStudyDetail.explain()StudyDetail.filter()StudyDetail.first()StudyDetail.get()StudyDetail.get_list()StudyDetail.id_param_keyStudyDetail.identifierStudyDetail.list_relationships()StudyDetail.list_supported_params()StudyDetail.list_urls()StudyDetail.page()StudyDetail.page_size()StudyDetail.pagination_statusStudyDetail.paramsStudyDetail.preview()StudyDetail.request_urlStudyDetail.resolve_query_string()StudyDetail.resourceStudyDetail.resultsStudyDetail.results_idsStudyDetail.sub_url()StudyDetail.to_df()StudyDetail.to_json()StudyDetail.to_list()StudyDetail.to_polars()StudyDetail.url_path()StudyDetail.validate_endpoint_kwargs()StudyDetail.configStudyDetail.execStudyDetail.countStudyDetail.total_pagesStudyDetail.default_page_sizeStudyDetail.request_urls
SampleDetailSampleDetail.RESOURCESampleDetail.afirst()SampleDetail.aget()SampleDetail.aget_list()SampleDetail.apage()SampleDetail.base_urlSampleDetail.dataSampleDetail.describe_endpoint()SampleDetail.describe_relationships()SampleDetail.dry_run()SampleDetail.emgapi_docsSampleDetail.emgapi_resourceSampleDetail.endpoint_moduleSampleDetail.explain()SampleDetail.filter()SampleDetail.first()SampleDetail.get()SampleDetail.get_list()SampleDetail.id_param_keySampleDetail.identifierSampleDetail.list_relationships()SampleDetail.list_supported_params()SampleDetail.list_urls()SampleDetail.page()SampleDetail.page_size()SampleDetail.pagination_statusSampleDetail.paramsSampleDetail.preview()SampleDetail.request_urlSampleDetail.resolve_query_string()SampleDetail.resourceSampleDetail.resultsSampleDetail.results_idsSampleDetail.sub_url()SampleDetail.to_df()SampleDetail.to_json()SampleDetail.to_list()SampleDetail.to_polars()SampleDetail.url_path()SampleDetail.validate_endpoint_kwargs()SampleDetail.configSampleDetail.execSampleDetail.countSampleDetail.total_pagesSampleDetail.default_page_sizeSampleDetail.request_urls
RunDetailRunDetail.RESOURCERunDetail.afirst()RunDetail.aget()RunDetail.aget_list()RunDetail.apage()RunDetail.base_urlRunDetail.dataRunDetail.describe_endpoint()RunDetail.describe_relationships()RunDetail.dry_run()RunDetail.emgapi_docsRunDetail.emgapi_resourceRunDetail.endpoint_moduleRunDetail.explain()RunDetail.filter()RunDetail.first()RunDetail.get()RunDetail.get_list()RunDetail.id_param_keyRunDetail.identifierRunDetail.list_relationships()RunDetail.list_supported_params()RunDetail.list_urls()RunDetail.page()RunDetail.page_size()RunDetail.pagination_statusRunDetail.paramsRunDetail.preview()RunDetail.request_urlRunDetail.resolve_query_string()RunDetail.resourceRunDetail.resultsRunDetail.results_idsRunDetail.sub_url()RunDetail.to_df()RunDetail.to_json()RunDetail.to_list()RunDetail.to_polars()RunDetail.url_path()RunDetail.validate_endpoint_kwargs()RunDetail.configRunDetail.execRunDetail.countRunDetail.total_pagesRunDetail.default_page_sizeRunDetail.request_urls
AnalysisDetailAnalysisDetail.RESOURCEAnalysisDetail.afirst()AnalysisDetail.aget()AnalysisDetail.aget_list()AnalysisDetail.apage()AnalysisDetail.base_urlAnalysisDetail.dataAnalysisDetail.describe_endpoint()AnalysisDetail.describe_relationships()AnalysisDetail.dry_run()AnalysisDetail.emgapi_docsAnalysisDetail.emgapi_resourceAnalysisDetail.endpoint_moduleAnalysisDetail.explain()AnalysisDetail.filter()AnalysisDetail.first()AnalysisDetail.get()AnalysisDetail.get_list()AnalysisDetail.id_param_keyAnalysisDetail.identifierAnalysisDetail.list_relationships()AnalysisDetail.list_supported_params()AnalysisDetail.list_urls()AnalysisDetail.page()AnalysisDetail.page_size()AnalysisDetail.pagination_statusAnalysisDetail.paramsAnalysisDetail.preview()AnalysisDetail.request_urlAnalysisDetail.resolve_query_string()AnalysisDetail.resourceAnalysisDetail.resultsAnalysisDetail.results_idsAnalysisDetail.sub_url()AnalysisDetail.to_df()AnalysisDetail.to_json()AnalysisDetail.to_list()AnalysisDetail.to_polars()AnalysisDetail.url_path()AnalysisDetail.validate_endpoint_kwargs()AnalysisDetail.configAnalysisDetail.execAnalysisDetail.countAnalysisDetail.total_pagesAnalysisDetail.default_page_sizeAnalysisDetail.request_urls
GenomeDetailGenomeDetail.RESOURCEGenomeDetail.afirst()GenomeDetail.aget()GenomeDetail.aget_list()GenomeDetail.apage()GenomeDetail.base_urlGenomeDetail.dataGenomeDetail.describe_endpoint()GenomeDetail.describe_relationships()GenomeDetail.dry_run()GenomeDetail.emgapi_docsGenomeDetail.emgapi_resourceGenomeDetail.endpoint_moduleGenomeDetail.explain()GenomeDetail.filter()GenomeDetail.first()GenomeDetail.get()GenomeDetail.get_list()GenomeDetail.id_param_keyGenomeDetail.identifierGenomeDetail.list_relationships()GenomeDetail.list_supported_params()GenomeDetail.list_urls()GenomeDetail.page()GenomeDetail.page_size()GenomeDetail.pagination_statusGenomeDetail.paramsGenomeDetail.preview()GenomeDetail.request_urlGenomeDetail.resolve_query_string()GenomeDetail.resourceGenomeDetail.resultsGenomeDetail.results_idsGenomeDetail.sub_url()GenomeDetail.to_df()GenomeDetail.to_json()GenomeDetail.to_list()GenomeDetail.to_polars()GenomeDetail.url_path()GenomeDetail.validate_endpoint_kwargs()GenomeDetail.configGenomeDetail.execGenomeDetail.countGenomeDetail.total_pagesGenomeDetail.default_page_sizeGenomeDetail.request_urls
AssemblyDetailAssemblyDetail.RESOURCEAssemblyDetail.afirst()AssemblyDetail.aget()AssemblyDetail.aget_list()AssemblyDetail.apage()AssemblyDetail.base_urlAssemblyDetail.dataAssemblyDetail.describe_endpoint()AssemblyDetail.describe_relationships()AssemblyDetail.dry_run()AssemblyDetail.emgapi_docsAssemblyDetail.emgapi_resourceAssemblyDetail.endpoint_moduleAssemblyDetail.explain()AssemblyDetail.filter()AssemblyDetail.first()AssemblyDetail.get()AssemblyDetail.get_list()AssemblyDetail.id_param_keyAssemblyDetail.identifierAssemblyDetail.list_relationships()AssemblyDetail.list_supported_params()AssemblyDetail.list_urls()AssemblyDetail.page()AssemblyDetail.page_size()AssemblyDetail.pagination_statusAssemblyDetail.paramsAssemblyDetail.preview()AssemblyDetail.request_urlAssemblyDetail.resolve_query_string()AssemblyDetail.resourceAssemblyDetail.resultsAssemblyDetail.results_idsAssemblyDetail.sub_url()AssemblyDetail.to_df()AssemblyDetail.to_json()AssemblyDetail.to_list()AssemblyDetail.to_polars()AssemblyDetail.url_path()AssemblyDetail.validate_endpoint_kwargs()AssemblyDetail.configAssemblyDetail.execAssemblyDetail.countAssemblyDetail.total_pagesAssemblyDetail.default_page_sizeAssemblyDetail.request_urls
BiomeDetailBiomeDetail.RESOURCEBiomeDetail.afirst()BiomeDetail.aget()BiomeDetail.aget_list()BiomeDetail.apage()BiomeDetail.base_urlBiomeDetail.dataBiomeDetail.describe_endpoint()BiomeDetail.describe_relationships()BiomeDetail.dry_run()BiomeDetail.emgapi_docsBiomeDetail.emgapi_resourceBiomeDetail.endpoint_moduleBiomeDetail.explain()BiomeDetail.filter()BiomeDetail.first()BiomeDetail.get()BiomeDetail.get_list()BiomeDetail.id_param_keyBiomeDetail.identifierBiomeDetail.lineagesBiomeDetail.list_relationships()BiomeDetail.list_supported_params()BiomeDetail.list_urls()BiomeDetail.page()BiomeDetail.page_size()BiomeDetail.pagination_statusBiomeDetail.paramsBiomeDetail.preview()BiomeDetail.request_urlBiomeDetail.resolve_query_string()BiomeDetail.resourceBiomeDetail.resultsBiomeDetail.results_idsBiomeDetail.show_tree()BiomeDetail.sub_url()BiomeDetail.to_df()BiomeDetail.to_json()BiomeDetail.to_list()BiomeDetail.to_polars()BiomeDetail.treeBiomeDetail.url_path()BiomeDetail.validate_endpoint_kwargs()BiomeDetail.configBiomeDetail.execBiomeDetail.countBiomeDetail.total_pagesBiomeDetail.default_page_sizeBiomeDetail.request_urls
PublicationDetailPublicationDetail.RESOURCEPublicationDetail.afirst()PublicationDetail.aget()PublicationDetail.aget_list()PublicationDetail.apage()PublicationDetail.base_urlPublicationDetail.dataPublicationDetail.describe_endpoint()PublicationDetail.describe_relationships()PublicationDetail.dry_run()PublicationDetail.emgapi_docsPublicationDetail.emgapi_resourcePublicationDetail.endpoint_modulePublicationDetail.explain()PublicationDetail.filter()PublicationDetail.first()PublicationDetail.get()PublicationDetail.get_list()PublicationDetail.id_param_keyPublicationDetail.identifierPublicationDetail.list_relationships()PublicationDetail.list_supported_params()PublicationDetail.list_urls()PublicationDetail.page()PublicationDetail.page_size()PublicationDetail.pagination_statusPublicationDetail.paramsPublicationDetail.preview()PublicationDetail.request_urlPublicationDetail.resolve_query_string()PublicationDetail.resourcePublicationDetail.resultsPublicationDetail.results_idsPublicationDetail.sub_url()PublicationDetail.to_df()PublicationDetail.to_json()PublicationDetail.to_list()PublicationDetail.to_polars()PublicationDetail.url_path()PublicationDetail.validate_endpoint_kwargs()PublicationDetail.configPublicationDetail.execPublicationDetail.countPublicationDetail.total_pagesPublicationDetail.default_page_sizePublicationDetail.request_urls
CatalogueDetailCatalogueDetail.RESOURCECatalogueDetail.afirst()CatalogueDetail.aget()CatalogueDetail.aget_list()CatalogueDetail.apage()CatalogueDetail.base_urlCatalogueDetail.dataCatalogueDetail.describe_endpoint()CatalogueDetail.describe_relationships()CatalogueDetail.dry_run()CatalogueDetail.emgapi_docsCatalogueDetail.emgapi_resourceCatalogueDetail.endpoint_moduleCatalogueDetail.explain()CatalogueDetail.filter()CatalogueDetail.first()CatalogueDetail.get()CatalogueDetail.get_list()CatalogueDetail.id_param_keyCatalogueDetail.identifierCatalogueDetail.list_relationships()CatalogueDetail.list_supported_params()CatalogueDetail.list_urls()CatalogueDetail.page()CatalogueDetail.page_size()CatalogueDetail.pagination_statusCatalogueDetail.paramsCatalogueDetail.preview()CatalogueDetail.request_urlCatalogueDetail.resolve_query_string()CatalogueDetail.resourceCatalogueDetail.resultsCatalogueDetail.results_idsCatalogueDetail.sub_url()CatalogueDetail.to_df()CatalogueDetail.to_json()CatalogueDetail.to_list()CatalogueDetail.to_polars()CatalogueDetail.url_path()CatalogueDetail.validate_endpoint_kwargs()CatalogueDetail.configCatalogueDetail.execCatalogueDetail.countCatalogueDetail.total_pagesCatalogueDetail.default_page_sizeCatalogueDetail.request_urls
- mgnipy.V2.query_executor module
- mgnipy.V2.query_set module
QuerySetQuerySet.configQuerySet.execQuerySet.countQuerySet.total_pagesQuerySet.default_page_sizeQuerySet.request_urlsQuerySet.request_urlQuerySet.endpoint_moduleQuerySet.paramsQuerySet.resultsQuerySet.results_idsQuerySet.resourceQuerySet.filter()QuerySet.page_size()QuerySet.base_urlQuerySet.pagination_statusQuerySet.dry_run()QuerySet.list_urls()QuerySet.explain()QuerySet.preview()QuerySet.first()QuerySet.afirst()QuerySet.id_param_keyQuerySet.identifierQuerySet.dataQuerySet.describe_endpoint()QuerySet.emgapi_docsQuerySet.emgapi_resourceQuerySet.list_supported_params()QuerySet.resolve_query_string()QuerySet.sub_url()QuerySet.to_df()QuerySet.to_json()QuerySet.to_list()QuerySet.to_polars()QuerySet.url_path()QuerySet.validate_endpoint_kwargs()QuerySet.list_relationships()QuerySet.describe_relationships()
- mgnipy.emgapi_v2_client package
AuthenticatedClientAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.with_headers()AuthenticatedClient.with_cookies()AuthenticatedClient.with_timeout()AuthenticatedClient.set_httpx_client()AuthenticatedClient.get_httpx_client()AuthenticatedClient.set_async_httpx_client()AuthenticatedClient.get_async_httpx_client()
Client- Subpackages
- mgnipy.emgapi_v2_client.api package
- mgnipy.emgapi_v2_client.models package
AdditionalContainedGenomeSchemaAnalysedRunAnalysedRunDetailAnalysisGetMgnifyAnalysisWithAnnotationsOfTypeMGnifyFunctionalAnalysisAnnotationTypeAssemblyAssemblyDetailAssemblyDetailMetadataType0AssemblyDetailStatusType0BiomeBiomeListFiltersDownloadFileIndexFileDownloadFileIndexFileIndexTypeDownloadFileTypeDownloadTypeENASampleFieldsENAStudyFieldsEuropePmcAnnotationEuropePmcAnnotationGroupEuropePmcAnnotationMentionEuropePmcAnnotationTagExperimentTypesGenomeAssemblyLinkSchemaGenomeCatalogueBaseGenomeCatalogueBaseCatalogueTypeGenomeCatalogueBaseOtherStatsType0GenomeCatalogueDetailGenomeCatalogueDetailCatalogueTypeGenomeCatalogueDetailOtherStatsType0GenomeCatalogueListGenomeCatalogueListCatalogueTypeGenomeCatalogueListOtherStatsType0GenomeDetailGenomeListGenomeSchemaGenomeTypeGenomeWithAnnotationsGenomeWithAnnotationsAnnotationsInputListMgnifyPublicationsOrderType0ListMgnifySamplesOrderType0ListMgnifyStudiesOrderType0MGnifyAnalysisMGnifyAnalysisDetailMGnifyAnalysisDetailMetadataType0MGnifyAnalysisDetailQualityControlSummaryType0MGnifyAnalysisDownloadFileMGnifyAnalysisTypedAnnotationMGnifyAnalysisWithAnnotationsMGnifyAnalysisWithAnnotationsAnnotationsMGnifyAnalysisWithAnnotationsAnnotationsAdditionalPropertyType1MGnifyAnalysisWithAnnotationsMetadataType0MGnifyAnalysisWithAnnotationsQualityControlSummaryType0MGnifyDownloadFileIndexFileMGnifyDownloadFileIndexFileIndexTypeMGnifyFunctionalAnalysisAnnotationTypeMGnifyGenomeDownloadFileMGnifyPublicationMGnifyPublicationDetailMGnifyPublicationDetailMetadataMGnifyPublicationMetadataMGnifySampleMGnifySampleDetailMGnifySampleDetailMetadataMGnifySampleWithMetadataMGnifySampleWithMetadataMetadataMGnifyStudyMGnifyStudyDetailMGnifyStudyDetailMetadataMGnifyStudyDownloadFileNinjaPaginationResponseSchemaAdditionalContainedGenomeSchemaNinjaPaginationResponseSchemaAnalysedRunNinjaPaginationResponseSchemaAssemblyNinjaPaginationResponseSchemaAssemblyDetailNinjaPaginationResponseSchemaBiomeNinjaPaginationResponseSchemaGenomeAssemblyLinkSchemaNinjaPaginationResponseSchemaGenomeCatalogueListNinjaPaginationResponseSchemaGenomeListNinjaPaginationResponseSchemaMGnifyAnalysisNinjaPaginationResponseSchemaMGnifyAnalysisDetailNinjaPaginationResponseSchemaMGnifyAnalysisTypedAnnotationNinjaPaginationResponseSchemaMGnifyPublicationNinjaPaginationResponseSchemaMGnifySampleNinjaPaginationResponseSchemaMGnifySampleWithMetadataNinjaPaginationResponseSchemaMGnifyStudyNinjaPaginationResponseSchemaSuperStudyOrderByFilterLiteralaccessionAccessionUpdatedAtUpdatedAtOrderByFilterLiteralaccessionAccessionUpdatedAtUpdatedAtOrderType0OrderByFilterLiteralpublishedYearPublishedYearOrderByFilterLiteralpublishedYearPublishedYearOrderType0OrderByFilterLiteralsampleTitleSampleTitleUpdatedAtUpdatedAtOrderByFilterLiteralsampleTitleSampleTitleUpdatedAtUpdatedAtOrderType0PipelineVersionsPublicationAnnotationsPublicationListFiltersRunListFiltersSampleListFiltersSchemaStudyListFiltersSuperStudySuperStudyDetailTokenVerifyInputSchemaWebinTokenRefreshRequestWebinTokenRequestWebinTokenResponse- Submodules
- mgnipy.emgapi_v2_client.models.additional_contained_genome_schema module
- mgnipy.emgapi_v2_client.models.analysed_run module
- mgnipy.emgapi_v2_client.models.analysed_run_detail module
- mgnipy.emgapi_v2_client.models.analysis_get_mgnify_analysis_with_annotations_of_type_m_gnify_functional_analysis_annotation_type module
- mgnipy.emgapi_v2_client.models.assembly module
- mgnipy.emgapi_v2_client.models.assembly_detail module
- mgnipy.emgapi_v2_client.models.assembly_detail_metadata_type_0 module
- mgnipy.emgapi_v2_client.models.assembly_detail_status_type_0 module
- mgnipy.emgapi_v2_client.models.biome module
- mgnipy.emgapi_v2_client.models.biome_list_filters module
- mgnipy.emgapi_v2_client.models.download_file_index_file module
- mgnipy.emgapi_v2_client.models.download_file_index_file_index_type module
- mgnipy.emgapi_v2_client.models.download_file_type module
- mgnipy.emgapi_v2_client.models.download_type module
- mgnipy.emgapi_v2_client.models.ena_sample_fields module
- mgnipy.emgapi_v2_client.models.ena_study_fields module
- mgnipy.emgapi_v2_client.models.europe_pmc_annotation module
- mgnipy.emgapi_v2_client.models.europe_pmc_annotation_group module
- mgnipy.emgapi_v2_client.models.europe_pmc_annotation_mention module
- mgnipy.emgapi_v2_client.models.europe_pmc_annotation_tag module
- mgnipy.emgapi_v2_client.models.experiment_types module
- mgnipy.emgapi_v2_client.models.genome_assembly_link_schema module
- mgnipy.emgapi_v2_client.models.genome_catalogue_base module
- mgnipy.emgapi_v2_client.models.genome_catalogue_base_catalogue_type module
- mgnipy.emgapi_v2_client.models.genome_catalogue_base_other_stats_type_0 module
- mgnipy.emgapi_v2_client.models.genome_catalogue_detail module
- mgnipy.emgapi_v2_client.models.genome_catalogue_detail_catalogue_type module
- mgnipy.emgapi_v2_client.models.genome_catalogue_detail_other_stats_type_0 module
- mgnipy.emgapi_v2_client.models.genome_catalogue_list module
- mgnipy.emgapi_v2_client.models.genome_catalogue_list_catalogue_type module
- mgnipy.emgapi_v2_client.models.genome_catalogue_list_other_stats_type_0 module
- mgnipy.emgapi_v2_client.models.genome_detail module
- mgnipy.emgapi_v2_client.models.genome_list module
- mgnipy.emgapi_v2_client.models.genome_schema module
- mgnipy.emgapi_v2_client.models.genome_type module
- mgnipy.emgapi_v2_client.models.genome_with_annotations module
- mgnipy.emgapi_v2_client.models.genome_with_annotations_annotations module
- mgnipy.emgapi_v2_client.models.input_ module
- mgnipy.emgapi_v2_client.models.list_mgnify_publications_order_type_0 module
- mgnipy.emgapi_v2_client.models.list_mgnify_samples_order_type_0 module
- mgnipy.emgapi_v2_client.models.list_mgnify_studies_order_type_0 module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_detail module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_detail_metadata_type_0 module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_detail_quality_control_summary_type_0 module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_download_file module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_typed_annotation module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_with_annotations module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_with_annotations_annotations module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_with_annotations_annotations_additional_property_type_1 module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_with_annotations_metadata_type_0 module
- mgnipy.emgapi_v2_client.models.m_gnify_analysis_with_annotations_quality_control_summary_type_0 module
- mgnipy.emgapi_v2_client.models.m_gnify_download_file_index_file module
- mgnipy.emgapi_v2_client.models.m_gnify_download_file_index_file_index_type module
- mgnipy.emgapi_v2_client.models.m_gnify_functional_analysis_annotation_type module
- mgnipy.emgapi_v2_client.models.m_gnify_genome_download_file module
- mgnipy.emgapi_v2_client.models.m_gnify_publication module
- mgnipy.emgapi_v2_client.models.m_gnify_publication_detail module
- mgnipy.emgapi_v2_client.models.m_gnify_publication_detail_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_publication_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_sample module
- mgnipy.emgapi_v2_client.models.m_gnify_sample_detail module
- mgnipy.emgapi_v2_client.models.m_gnify_sample_detail_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_sample_with_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_sample_with_metadata_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_study module
- mgnipy.emgapi_v2_client.models.m_gnify_study_detail module
- mgnipy.emgapi_v2_client.models.m_gnify_study_detail_metadata module
- mgnipy.emgapi_v2_client.models.m_gnify_study_download_file module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_additional_contained_genome_schema module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_analysed_run module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_assembly module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_assembly_detail module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_biome module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_genome_assembly_link_schema module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_genome_catalogue_list module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_genome_list module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_analysis module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_analysis_detail module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_analysis_typed_annotation module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_publication module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_sample module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_sample_with_metadata module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_m_gnify_study module
- mgnipy.emgapi_v2_client.models.ninja_pagination_response_schema_super_study module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalaccession_accession_updated_at_updated_at module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalaccession_accession_updated_at_updated_at_order_type_0 module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalpublished_year_published_year module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalpublished_year_published_year_order_type_0 module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalsample_title_sample_title_updated_at_updated_at module
- mgnipy.emgapi_v2_client.models.order_by_filter_literalsample_title_sample_title_updated_at_updated_at_order_type_0 module
- mgnipy.emgapi_v2_client.models.pipeline_versions module
- mgnipy.emgapi_v2_client.models.publication_annotations module
- mgnipy.emgapi_v2_client.models.publication_list_filters module
- mgnipy.emgapi_v2_client.models.run_list_filters module
- mgnipy.emgapi_v2_client.models.sample_list_filters module
- mgnipy.emgapi_v2_client.models.schema module
- mgnipy.emgapi_v2_client.models.study_list_filters module
- mgnipy.emgapi_v2_client.models.super_study module
- mgnipy.emgapi_v2_client.models.super_study_detail module
- mgnipy.emgapi_v2_client.models.token_verify_input_schema module
- mgnipy.emgapi_v2_client.models.webin_token_refresh_request module
- mgnipy.emgapi_v2_client.models.webin_token_request module
- mgnipy.emgapi_v2_client.models.webin_token_response module
- Submodules
- mgnipy.emgapi_v2_client.client module
ClientAuthenticatedClientAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.raise_on_unexpected_statusAuthenticatedClient.tokenAuthenticatedClient.prefixAuthenticatedClient.auth_header_nameAuthenticatedClient.with_headers()AuthenticatedClient.with_cookies()AuthenticatedClient.with_timeout()AuthenticatedClient.set_httpx_client()AuthenticatedClient.get_httpx_client()AuthenticatedClient.set_async_httpx_client()AuthenticatedClient.get_async_httpx_client()
- mgnipy.emgapi_v2_client.errors module
- mgnipy.emgapi_v2_client.types module
Submodules#
mgnipy.cli module#
mgnipy.mgnipy module#
- class mgnipy.mgnipy.MGnipy(**config)[source]#
Bases:
object- describe_resource(resource, as_dict=False)[source]#
Describe the supported parameters for a given resource by parsing the docstring of the corresponding endpoint module.
- Parameters:
- Returns:
A dictionary mapping parameter names to their descriptions if as_dict is True, otherwise None.
- Return type:
dict of str to str or None